Section: Software

Bioinformatics community tools

Participants : Olivier Collin [contact] , Olivier Sallou, Charles Deltel, François Moreews, Anthony Bretaudeau, Delphine Naquin, Aurélien Roult, Romaric Sabas, Claudia Hériveau.

• BioMAJ See first section above.

• GRISBI The GRISBI project is aiming to set up a grid infrastructure devoted to the Bioinformatics community. This infrastructure is built upon the resources available on different bioinformatics facilities through gLite middleware. [Web site: http://www.grisbio.fr]

• Mobylenet In partnership with other bioinformatics platforms, GenOuest is setting up a distributed network of bioinformatics resources built upon web portals based on the Mobyle platform. [Web site: http://mobylenet.rpbs.univ-paris-diderot.fr:8080/]

• MetaData platform Seqcrawler is an indexing platform for biological meta data and sequences, providing a google like web interface. It can scale from single computers to the cloud. [Web site: http://seqcrawler.sourceforge.net/]

• DrMotifs DrMotifs is a new software resource aiming at the integration of different software commonly used in pattern search and discovery. This resource will also integrate new software elaborated by the Symbiose team. [Web site: http://www.drmotifs.org] [Blog site: http://drmotifs.genouest.org]